Explore projects

Computational models of different aspects of COVID-19

An R package for generating chemical stripes from patent or literature data extracted from PubChem

STAR and DESeq2

Integrated meta-omics pipeline

Repository for NORMAN-SLE work organization at ECI, including list tracking, updates and documentation. Main representatives: Emma and Hiba.

A project for interactions with PubChem

R code for an interface to MINERVA API and helper functions

seesaw_code project, see details in:

Repository for scripts used in the analyses for the publication "Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance"

Additional analyses for IMP manuscript

CO-INFECTOMICS - identification of co-infections and other factors associated with COVID-19 severity in the gut microbiome

Template repository for writing a paper the R3 way.

LAO time series analyses

Code used for the analysis of the RNA-seq, ATAC-seq and ChIP-seq datasets produced in this study. Original fastq files deposited in https://ega-archive.org/, under the accession number EGAD00001009288.