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This R package contains functions that can be useful to analyse microarray data.

Integrated meta-omics pipeline

Treating compound mixes

An automated workflow for constructing maps of molecular mechanisms for given diseases. It streamlines querying gene-disease and variant-disease associations, calculating enrichment of disease maps and pathways, and combining enriched diagrams with text mining data into a single map, meant for the MINERVA Platform.

Utilities that work with GNPS records.

A project for interactions with PubChem

A project for interactions with PubChem

This GitLab folder provides the scripts that were used in my Master Thesis Project. For any types of questions, please feel free to contact me.

The COVIDminer text mining project (https://rupertoverall.net/covidminer/) reads the published literature concerning SARS-CoV-2 and COVID-19 to extract statements about (primarily molecular) interactions. Using the API associated with this project, p

A repository to store code used in various projects for data cleanup, integration or analysis.

PubChem PFAS