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This project hosts the JSON schemas used for representing the metadata of submissions to the ELIXIR translational data repository. It also provides validation utility methods.
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Computational modelling and simulation / C19DM-Neo4j database
GNU General Public License v3.0 or laterUpdated -
R3 / apps / generator
Apache License 2.0This project includes the generator scripts for generating the index files of the howto-cards and modules (handbook, qms, ...)
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Elisa Gomezdelope / ML_PD_metab_transc
MIT LicenseThis repository contains the code for ML analyses performed in Chapter 4 of my PhD thesis "Interpretable Machine Learning on omics data for biomarker discovery in Parkinson's disease". The project consists on performing Parkinson's disease (PD) case-control classification from blood plasma metabolomics measurements at the baseline clinical visit from the LuxPARK cohort, and from whole blood transcriptomics data at baseline as well as dynamic features engineered from a short temporal series of 4 timepoints from the PPMI cohort. The study involves evaluation of different feature selection strategies, The goal was to build and test a collection of ML models and, most interestingly, identify molecular and higher-level functional representations associated with PD diagnosis.
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R3 / outreach / papers / cobrexa / benchmarks
Apache License 2.0Benchmark scripts related to the COBREXA.jl publication
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This project hosts the JSON schemas used for representing the metadata of submissions to the ELIXIR translational data repository. It also provides validation utility methods.
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LCSB / Static Page System / Base static site / template
Apache License 2.0HTML and CSS template for the static sites
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Francesco Nasta / basic-practice-pages
MIT LicenseBasic practice repository for git trainings
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Zhi Zhang / bsa4yeast
GNU General Public License v3.0 or laterUpdated -
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BDS / Ml Dyskinesia
MIT LicenseUpdated -
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An example repository demonstrating the integration of Django with OIDC
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Jacek Lebioda / ChemPert
GNU Affero General Public License v3.0Updated