Explore projects

This is a pipeline to re-assemble the LAO isolate genomes. I could be potentially modified and applied to any other genome sequencing project.

Persistence of birth mode-dependent effects on gut microbiome composition, immune system stimulation and antimicrobial resistance during the first year of life

This GitLab folder provides the scripts that were used in my Master Thesis Project. For any types of questions, please feel free to contact me.

Mouse microglia regional heterogeneity in single cell resolution

A project for interactions with PubChem

Repository for scripts used in the analyses for the publication "Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance"

Repository for all slides related to R3 courses.

LAO time series analyses

This GitLab folder provides the scripts that were used in my Master Thesis Project. For any types of questions, please feel free to contact me.

A project for interactions with PubChem

Repository for all slides related to R3 courses.

drake / docker / gitlab-CI

from https://gitlab.com/ecohealthalliance/drake-gitlab-docker-example

from https://gitlab.com/ecohealthalliance/drake-gitlab-docker-example

Template repository for writing a paper the R3 way.

Integrated Network approach for Cellular Transitions through SIgnalling MOlecules

Integrated meta-omics pipeline