Explore projects

https://howto.lcsb.uni.lu

https://howto.lcsb.uni.lu

This repository contains the code for statistical analyses performed in Chapter 3 of my thesis "Cross-sectional and longitudinal profiling of PD transcriptomics and metabolomics". The project consists on whole blood transcriptomics and blood plasma metabolomics cross-sectional and longitudinal profiling of Parkinson's disease patients and controls from the PPMI cohort and the LuxPARK cohort respectively, to identify differential molecular and higher-level functional features in PD.

Repository for all slides related to R3 courses.

An automated workflow for constructing maps of molecular mechanisms for given diseases. It streamlines querying gene-disease and variant-disease associations, calculating enrichment of disease maps and pathways, and combining enriched diagrams with text mining data into a single map, meant for the MINERVA Platform.

https://r3.pages.uni.lu/howto-cards

Repository for building the official website of the R3 lab.

Here is the presence on the university website.

Repository for all slides related to R3 courses.

Repository for all slides related to R3 courses.

CO-INFECTOMICS - identification of co-infections and other factors associated with COVID-19 severity in the gut microbiome

Method testing and analyses of Oxford Nanopore Technology (ONT) sequencing runs Data obtained by sequencing "generous donor B" across several runs Original data prepared by Rashi (post-sequencing) Initial analyses performed by CCL

Code related to the agent-based SEIR-ICU model

Practice repository basic git training.