Add PlasFlow and RGI
merge checkpoint_snakefile_VG
into checkpoint_snakefile
to include PlasFlow
and RGI
Note:
The config file and main snakemake
file have been adjusted.
Further changes should be made in other snakemake
files as only the files for the analysis
step have been adjusted.
See commits mentioned in the issue #28 (closed) and #29 (closed).