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Transfer learning

Graph representation learning modelling pipeline exploiting sample-similarity networks derived from high-throughput omics profiles to learn PD-specific fingerprints from the spatial distribution of molecular abundance similarities in an end-to-end fashion. The scripts apply the graph representation learning modelling pipeline on sample-similarity networks of transcriptomics and metabolomics data from the PPMI and the LuxPARK cohort, respectively.

R code for an interface to MINERVA API and helper functions

A repository to store code used in various projects for data cleanup, integration or analysis.

STAR and DESeq2

R code for an interface to MINERVA API and helper functions