Merge branch '2255-duplication-of-protein-modification-residues' into 'devel_18.2.x'

Resolve "Duplication of protein modification residues"

See merge request !1892

CHANGELOG

 minerva (18.2.1) stable; urgency=medium
   * Bug fix: project status on project upload did not refresh properly (#2258)
+  * Bug fix: export to CellDesigner could duplicate modification residues when
+    rounding issues appeared (#2255)
 
  -- Piotr Gawron <piotr.gawron@uni.lu>  Wed, 09 Apr 2025 13:00:00 +0200
 

converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/species/SpeciesWithModificationData.java

@@ -125,12 +125,12 @@ public class SpeciesWithModificationData {
   }
 
   private String getResidueKey(final Residue residue) {
-    final int angle = (int) (new CellDesignerModificationResidue(residue).getAngle() * 1000);
+    final long angle = Math.round(new CellDesignerModificationResidue(residue).getAngle() * 1000);
     return residue.getName() + "_" + angle;
   }
 
   private String getBindingRegionKey(final BindingRegion residue) {
-    final int angle = (int) (new CellDesignerModificationResidue(residue).getAngle() * 1000);
+    final long angle = Math.round(new CellDesignerModificationResidue(residue).getAngle() * 1000);
     final int width = (int) residue.getWidth();
     final int height = (int) residue.getHeight();
     return residue.getName() + "_" + angle + "_" + width + "_" + height;