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For some reactions, reaction lines in SBML and CellDesigner differ

Attached is an example of an SBML file and from it generated CD file which shows a slightly different result (some of the lines which are orthogonal in SBML are not orthogonal in CD (at least in the way how they are interpreted by CellDesigner)).

BIOMD0000000002_url_sbo-cc_0--from--R-MMU-8956320-Nucleobase_biosynthesis-Mus_musculus_fixed-cc1-tmp_order_0-tgt-ddup_False_tmp-ddup_False.svg

BIOMD0000000002_url_sbo-cc_0--from--R-MMU-8956320-Nucleobase_biosynthesis-Mus_musculus_fixed-cc1-tmp_order_0-tgt-ddup_False_tmp-ddup_False-cd.xml

BIOMD0000000002_url_sbo-cc_0--from--R-MMU-8956320-Nucleobase_biosynthesis-Mus_musculus_fixed-cc1-tmp_order_0-tgt-ddup_False_tmp-ddup_False.xml